The attractive forces of the built-in d3.forceManyBody can be modified with the strength() method so try something like
// starts simulation var simulation = d3 .forceSimulation() .force("link", d3.forceLink()) .force("charge", d3.forceManyBody().strength(-5)) .force("center", d3.forceCenter(width /2, height / 2))
If that constrains the other items too closely then you would have to implement your own force method which can constrain items based on the SVG size. See d3.force for a description of what is happening under-the-hood and to see how you could produce your own function.
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